Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897178.1_cds_XP_016448065.1_42760
CDS Infomation

[gene=LOC107773132] [db_xref=GeneID:107773132] [protein=phenylalanine--tRNA ligase beta subunit, cytoplasmic-like isoform X5] [protein_id=XP_016448065.1] [location=complement(join(73314..73340,73565..73672,74055..74129,77915..78046,80297..80398,80495..80623,84470..84637,84722..84848,85847..85923,86059..86100,86178..86219,86387..86453,88417..88532,88654..88783,89050..89150,90061..90116,90227..90284))] [gbkey=CDS]
Sequence

ATGCCAACCGTCAGCGTTGGAAGAGACCGTCTGTTCGAAGCCCTTGGCTGTAGTTATACC
TATGAAGAATTCGACGAATTGTGCTTTAAGTTCGGTATTGAGCTTGAGGAGGCTACAACA
GAAAAAGCAATGCAAAGAAAAGAGAAGCATCTGGAGGAAGAGGCGATGGAAGATGATGGA
GAGATTATATACAAAATTGAAGTTCCAGCAAACAGATATGATTTGCTTTGTCTTGAAGGG
CTAGCTCAAGCTCTCCGAATATTTGGTGGGCTTGATCCGATCCCTACATATAAGGTGGCA
AATATTGGTAAAGAATCTATGCTTGAAATGCATGTCGGAAAAGAGACATCCAAGATCCGC
CCATATGTTGTGTGTGCTGTCTTAAGAGGTGTAACATTTGATGAGGCTAGGTACAATAGC
TTCATTGATCTACAAGATAAGCTGCATCAGAACATTTGCAGGCGAAGAACCTTGGTGGCA
ATTGGTACCCATGACCTAGATACAATTGAAGGACCTTTCACATATGAGGCTTTGCCTCCT
TCGGAAATTAATTTTGTGCCATTAAAGCAGACCAGAAACTTCAGAGCTGATGAGCTGATG
GAATTTTACAAATCGGATTTGAACTTGAAGAAGTTTCTGCACATAATCGCGAACTCACCA
GTGTACCCTGTTATATATGATTGTAAAAGGACTGTTTTGTCTTTGCCCCCCATTATCAAC
GGTGCACATTCAGCCATTACATTGAAAACAAAGAACGTGTTTATAGAATGTACAGCCACA
GATTTGACGAAGGCCAATGTTGTTTTGAACACAATGGTAACTATGTTTTCAGTGTACTGT
GAGCGGAAGTTTGAAGTTGAACCAGTTAAAGTAACATATCCTGATGGAAAATCGTTTGTT
TATCCTGATCTCTCAATCTACAATATGAATGTGCCTTTGTCCTACATCACTGGCATCATT
GGAGTTCAATTGCCAGAGAATGAGGTGGCTAGTTTGTTGCATAAAATGCAATTGCGTGCA
GTGGAATCTGTCTCAGAAAATGCAGAAGTCAAGTTTGTCGTATCGGTACCTCCCACAAGA
AGTGATGTCCTTCATCCTTGTGATGTAGCAGAGGATGTTGCAATTGCTTATGGCTACAAT
GAGATCCCGAAGAGAAGACCTGCATCATTGAAGCCTTTACCTCTCAGTCAATTTAGTGAT
CTAATTCGGTCGGAGATTGCAATGGCTGGTTATACGGAGGTCCTAACATGGATCTTGTGT
TCCAAGAGAGAAATTTCTTCCATGTTGAACTGTGAAGAGGATAAGTCTGCTGTAATCATT
GCTGATTCTCGTACATCTGAATTTGAGGTTGTGCGGACTAATCTCATGCCTGGATTATTG
AGAACCGTTGGACATAACAAGGACCATCCAAAGCCTATGAAGATTTTTGAAGTTGGTGAT
GTAGTCCTGTTAGATGGCACAAAGGATGTTGGTGCAGTAAACCGTCGCCACCTTGCTGCT
CTGTATTGCGGCGCTAACTCAGGATTTGAGGGAGATTTGGTTACCACTTGCCAGTGA

Peptide Sequence

PEP ID

XP_016448065.1
PEP Infomation

PREDICTED: phenylalanine--tRNA ligase beta subunit, cytoplasmic-like isoform X5 [Nicotiana tabacum]
Sequence

MPTVSVGRDRLFEALGCSYTYEEFDELCFKFGIELEEATTEKAMQRKEKHLEEEAMEDDG
EIIYKIEVPANRYDLLCLEGLAQALRIFGGLDPIPTYKVANIGKESMLEMHVGKETSKIR
PYVVCAVLRGVTFDEARYNSFIDLQDKLHQNICRRRTLVAIGTHDLDTIEGPFTYEALPP
SEINFVPLKQTRNFRADELMEFYKSDLNLKKFLHIIANSPVYPVIYDCKRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKANVVLNTMVTMFSVYCERKFEVEPVKVTYPDGKSFV
YPDLSIYNMNVPLSYITGIIGVQLPENEVASLLHKMQLRAVESVSENAEVKFVVSVPPTR
SDVLHPCDVAEDVAIAYGYNEIPKRRPASLKPLPLSQFSDLIRSEIAMAGYTEVLTWILC
SKREISSMLNCEEDKSAVIIADSRTSEFEVVRTNLMPGLLRTVGHNKDHPKPMKIFEVGD
VVLLDGTKDVGAVNRRHLAALYCGANSGFEGDLVTTCQ

Transcript Sequence

Gene sequence data has not been registered.